Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | AX777_02255 | Not Available | Negative | 5227304 - 5228242 | 31869.7 |
| peptidase | AX777_02260 | P37177 | Negative | 5228317 - 5230590 | 84357.3 |
| aminotransferase | AX777_02265 | Q0BVW4 | Positive | 5230787 - 5231944 | 41275.9 |
| aminotransferase | AX777_02270 | Q0S962 | Positive | 5232089 - 5233255 | 41563.4 |
| hypothetical protein | AX777_02275 | Not Available | Negative | 5233324 - 5233860 | 18588.2 |
| calcium-binding protein | AX777_02285 | Not Available | Negative | 5236693 - 5237448 | 25290.2 |
| hypothetical protein | AX777_02290 | Not Available | Negative | 5237523 - 5237831 | 10801.1 |
| oligogalacturonate lyase | AX777_02295 | Not Available | Positive | 5238056 - 5239315 | 46472.7 |
| hypothetical protein | AX777_02300 | Not Available | Positive | 5240325 - 5241284 | 35064.0 |
| atpase | AX777_02305 | Not Available | Negative | 5241247 - 5241714 | 17312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

