Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | AX777_01850 | Q32KX8 | Negative | 5145244 - 5145888 | 22848.2 |
| glycine dehydrogenase | AX777_01855 | Q9A354 | Negative | 5145962 - 5147533 | 55744.9 |
| glycine dehydrogenase | AX777_01860 | Q1GRZ2 | Negative | 5147530 - 5148888 | 47840.7 |
| glycine cleavage system protein h | AX777_01865 | A7HQX9 | Negative | 5149041 - 5149412 | 13298.2 |
| aminomethyltransferase | AX777_01870 | O14110 | Negative | 5149439 - 5150602 | 41350.7 |
| hypothetical protein | AX777_01875 | Not Available | Negative | 5150979 - 5151263 | 10109.9 |
| gntr family transcriptional regulator | AX777_01880 | P0ACL7 | Negative | 5151395 - 5152072 | 24740.7 |
| gluconate permease | AX777_01885 | Q9ZIJ1 | Negative | 5152157 - 5153503 | 45149.1 |
| helix-turn-helix transcriptional regulator | AX777_01890 | Not Available | Positive | 5153787 - 5154056 | 10078.5 |
| glucose-fructose oxidoreductase | AX777_01895 | Q07982 | Positive | 5154085 - 5155188 | 39566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

