Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_25955 | Not Available | Negative | 5094210 - 5095142 | 35053.8 |
| mucr family transcriptional regulator | AX777_25835 | Q04152 | Positive | 5095681 - 5096142 | 16498.0 |
| integrase | AX777_25840 | P08320 | Negative | 5096192 - 5097394 | 44844.0 |
| transposase | AX777_25995 | P55373 | Negative | 5097679 - 5098734 | 40451.6 |
| 2fe-2s ferredoxin | AX777_01620 | Not Available | Positive | 5098900 - 5100153 | 46956.4 |
| fad-dependent oxidoreductase | AX777_01625 | Q8N2H3 | Positive | 5100181 - 5101791 | 57639.3 |
| aspartate carbamoyltransferase catalytic subunit | AX777_01630 | A5V3V4 | Positive | 5101846 - 5102841 | 35825.5 |
| dihydroorotase | AX777_01635 | C6DZ51 | Positive | 5102838 - 5104061 | 42119.0 |
| diguanylate cyclase | AX777_01640 | Q73RG3 | Negative | 5104058 - 5105206 | 41095.6 |
| ribonuclease bn | AX777_01645 | Not Available | Positive | 5105366 - 5106271 | 32543.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

