Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AX777_18085 | Not Available | Negative | 4997007 - 4997729 | 26896.4 |
| aldehyde dehydrogenase | AX777_18090 | Q8S528 | Positive | 4997887 - 4999374 | 52422.2 |
| gamma-carboxymuconolactone decarboxylase | AX777_18095 | Not Available | Positive | 4999371 - 5000180 | 28844.3 |
| short-chain dehydrogenase | AX777_18100 | A0QYC2 | Positive | 5000177 - 5000932 | 26006.6 |
| 6-phosphogluconate dehydrogenase | AX777_18105 | P9WNY2 | Positive | 5000929 - 5001738 | 27158.0 |
| short-chain dehydrogenase | AX777_18110 | P9WGQ8 | Positive | 5001759 - 5002544 | 26588.0 |
| tonb-dependent receptor | AX777_18115 | A1JTG3 | Positive | 5002847 - 5005069 | 80049.5 |
| amidohydrolase | AX777_18120 | Not Available | Positive | 5005168 - 5006817 | 60185.6 |
| amidohydrolase | AX777_18125 | Not Available | Positive | 5006858 - 5008549 | 62188.3 |
| arsr family transcriptional regulator | AX777_18130 | P37424 | Negative | 5008592 - 5009062 | 17950.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

