Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate lyase | AX777_18035 | P28306 | Positive | 4985843 - 4986814 | 34983.8 |
| homoserine o-succinyltransferase | AX777_18040 | A5V3T8 | Positive | 4987023 - 4987949 | 35367.7 |
| sugar transporter | AX777_18045 | Not Available | Negative | 4987960 - 4988379 | 14644.5 |
| hypothetical protein | AX777_18050 | Not Available | Positive | 4988487 - 4988990 | 18383.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AX777_18055 | Not Available | Negative | 4989096 - 4989419 | 12010.1 |
| pyridine nucleotide-disulfide oxidoreductase | AX777_18060 | X5CY81 | Negative | 4990049 - 4991275 | 43650.1 |
| rod shape-determining protein mreb | AX777_18065 | A0A0H3C7V4 | Negative | 4991399 - 4992436 | 36369.3 |
| glycosyl transferase family 1 | AX777_18070 | Not Available | Negative | 4992581 - 4993624 | 34912.7 |
| duf4440 domain-containing protein | AX777_18075 | Not Available | Negative | 4993846 - 4994235 | 13940.8 |
| tonb-dependent receptor | AX777_18080 | Not Available | Negative | 4994376 - 4996775 | 85790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

