Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase | AX777_17830 | Not Available | Negative | 4947574 - 4948050 | 16240.6 |
| udp-glucose 4-epimerase | AX777_17835 | Q59083 | Negative | 4948047 - 4949048 | 36003.9 |
| 3-hydroxyacyl-coa dehydrogenase | AX777_17840 | A1S7L6 | Negative | 4949116 - 4951293 | 76996.3 |
| acetyl-coa acetyltransferase | AX777_17845 | O53871 | Negative | 4951318 - 4952526 | 42391.0 |
| metallophosphoesterase | AX777_17850 | Not Available | Positive | 4952699 - 4953433 | 26536.7 |
| abc transporter permease | AX777_17855 | Not Available | Positive | 4953481 - 4955151 | 58848.3 |
| glycosyl transferase | AX777_17860 | O32146 | Negative | 4955194 - 4955790 | 21661.3 |
| gtp cyclohydrolase | AX777_17865 | Q9PC02 | Positive | 4955948 - 4956556 | 22731.2 |
| short-chain dehydrogenase | AX777_17870 | A7B3K3 | Positive | 4956553 - 4957413 | 30173.9 |
| enoyl-coa hydratase | AX777_17875 | P64017 | Positive | 4957498 - 4958274 | 27460.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

