Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | AX777_24850 | Not Available | Positive | 4734152 - 4735897 | 62164.5 |
| atp-dependent dna ligase | AX777_24855 | Q9I1X7 | Negative | 4736046 - 4738559 | 91766.5 |
| dna repair protein | AX777_24860 | C1F735 | Negative | 4738563 - 4739441 | 32333.1 |
| penicillin epimerase | AX777_24865 | Not Available | Negative | 4739853 - 4741115 | 45764.9 |
| tonb-dependent receptor | AX777_24870 | Not Available | Negative | 4741133 - 4743502 | 84371.4 |
| group ii intron reverse transcriptase/maturase | AX777_24875 | Q47688 | Negative | 4743871 - 4745193 | 50309.9 |
| hypothetical protein | AX777_19730 | Not Available | Negative | 4746184 - 4747836 | 56462.4 |
| hypothetical protein | AX777_19735 | Not Available | Negative | 4748089 - 4748469 | 13068.5 |
| Tmrna,resume consensus sequence (at 215): cacaagtgccaacgataa | Not Available | Not Available | Positive | 4748749 - 4749096 | Not Available |
| hypothetical protein | AX777_19745 | Not Available | Positive | 4749147 - 4749911 | 27524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

