Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coenzyme a synthetase | AX777_07680 | Q2G512 | Negative | 480434 - 482377 | 70571.3 |
| glutathione s-transferase | AX777_07685 | A0A0H3CDY2 | Positive | 482530 - 483201 | 25582.8 |
| diguanylate cyclase | AX777_07690 | Q9KKZ4 | Negative | 483223 - 484380 | 42319.7 |
| lysr family transcriptional regulator | AX777_07695 | P55576 | Negative | 484473 - 485357 | 32832.7 |
| aaa family atpase | AX777_07700 | O28972 | Positive | 485689 - 487983 | 83952.4 |
| methyltransferase | AX777_07705 | Not Available | Positive | 488124 - 488771 | 24107.0 |
| helix-turn-helix transcriptional regulator | AX777_07710 | Not Available | Positive | 488882 - 489982 | 39712.5 |
| gamma-glutamyl-phosphate reductase | AX777_07715 | A5V8T0 | Positive | 490344 - 491609 | 44141.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | AX777_07720 | Q0BTX5 | Negative | 491637 - 492464 | 28562.4 |
| hypothetical protein | AX777_07725 | Not Available | Negative | 492470 - 492763 | 11522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

