Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufd | AX777_07630 | P77689 | Positive | 471200 - 471952 | 26548.4 |
| cysteine desulfurase | AX777_07635 | Q9EXP2 | Positive | 471949 - 473154 | 42969.5 |
| fes assembly suf system protein | AX777_07640 | P70949 | Positive | 473151 - 473612 | 16551.6 |
| hesb/yadr/yfhf | AX777_07645 | Q07821 | Positive | 473612 - 473974 | 12638.0 |
| nad(p)-dependent oxidoreductase | AX777_07650 | Not Available | Positive | 473998 - 474813 | 29086.7 |
| multidrug transporter | AX777_07655 | Not Available | Negative | 475160 - 476050 | 31489.6 |
| threonine aldolase | AX777_07660 | O50584 | Negative | 476070 - 477095 | 35905.6 |
| branched chain amino acid aminotransferase | AX777_07665 | O86505 | Positive | 477250 - 478341 | 39111.4 |
| ubiquinone biosynthesis protein ubih | AX777_07670 | Q2RMZ4 | Positive | 478467 - 479675 | 42709.8 |
| cytochrome b | AX777_07675 | Not Available | Negative | 479803 - 480315 | 19264.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

