Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_22940 | Not Available | Negative | 4607787 - 4608683 | 32880.4 |
| integrase | AX777_22945 | Not Available | Positive | 4608968 - 4610476 | 54465.9 |
| hypothetical protein | AX777_22950 | Not Available | Negative | 4610504 - 4610767 | 9630.94 |
| sodium:dicarboxylate symporter | AX777_22955 | O59010 | Negative | 4610937 - 4612169 | 42880.0 |
| dipeptide epimerase | AX777_22960 | Not Available | Negative | 4612186 - 4613178 | 34414.5 |
| ebna-1 nuclear protein | AX777_22965 | Not Available | Negative | 4613184 - 4614221 | 36481.9 |
| lysr family transcriptional regulator | AX777_22970 | P03030 | Negative | 4614316 - 4615200 | 32488.3 |
| amidohydrolase | AX777_22975 | P72349 | Positive | 4615409 - 4616998 | 55974.9 |
| tonb-dependent receptor | AX777_22980 | Not Available | Negative | 4617238 - 4619985 | 97516.0 |
| penicillin acylase | AX777_22985 | P15558 | Positive | 4620520 - 4622901 | 87496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

