Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | AX777_25005 | Not Available | Negative | 4562960 - 4563739 | 29393.5 |
| hypothetical protein | AX777_25010 | Not Available | Negative | 4564029 - 4564292 | 10052.1 |
| hypothetical protein | AX777_25015 | P17791 | Positive | 4565159 - 4565824 | 23230.5 |
| hypothetical protein | AX777_25020 | Not Available | Positive | 4565846 - 4566187 | 12163.5 |
| type vi secretion protein | AX777_25025 | Q9S3N1 | Positive | 4566194 - 4566538 | 12305.2 |
| transporter | AX777_25030 | Not Available | Positive | 4566525 - 4568909 | 89856.5 |
| type iv secretion system protein virb5 | AX777_25035 | Not Available | Positive | 4568923 - 4569636 | 25560.2 |
| hypothetical protein | AX777_25040 | Not Available | Positive | 4569639 - 4569944 | 11246.8 |
| type iv secretion system protein virb6 | AX777_25045 | Not Available | Positive | 4569988 - 4571004 | 35835.8 |
| conjugal transfer protein traj | AX777_25050 | Q6FYW3 | Positive | 4571345 - 4572028 | 25149.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

