Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspa | AX777_19240 | Not Available | Negative | 4548436 - 4549251 | 29990.0 |
| gcn5 family acetyltransferase | AX777_19245 | Not Available | Positive | 4549412 - 4549915 | 18218.4 |
| hypothetical protein | AX777_19250 | P55561 | Negative | 4549996 - 4550667 | 23526.5 |
| coproporphyrinogen iii oxidase | AX777_19255 | O31381 | Positive | 4550804 - 4552111 | 47475.0 |
| tonb-dependent receptor | AX777_19260 | A5F9G0 | Negative | 4552154 - 4554118 | 70795.0 |
| tonb-dependent receptor | AX777_19270 | Not Available | Positive | 4555559 - 4558066 | 90553.2 |
| hypothetical protein | AX777_19275 | Not Available | Positive | 4558159 - 4558362 | 7366.73 |
| glycoside hydrolase | AX777_19280 | A7LXS9 | Negative | 4558359 - 4560782 | 87076.0 |
| nuclease | AX777_24995 | Not Available | Negative | 4561380 - 4561970 | 22150.5 |
| dna primase | AX777_25000 | Not Available | Negative | 4561964 - 4562845 | 32312.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

