Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | AX777_19140 | P28606 | Positive | 4533598 - 4534500 | 31816.2 |
| hypothetical protein | AX777_19145 | Not Available | Negative | 4534480 - 4535058 | 19911.7 |
| phosphoribosyl-atp pyrophosphatase | AX777_19150 | A5V9F7 | Negative | 4535143 - 4535463 | 11431.7 |
| cell wall anchor protein | AX777_19155 | Not Available | Negative | 4535506 - 4535754 | 8176.02 |
| imidazole glycerol phosphate synthase cyclase subunit | AX777_19160 | Q1GNC3 | Negative | 4535932 - 4536696 | 26416.7 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | AX777_19165 | Q2G9L9 | Negative | 4536817 - 4537554 | 25421.4 |
| imidazole glycerol phosphate synthase subunit hish | AX777_19170 | Q5NMD4 | Negative | 4537643 - 4538257 | 21787.1 |
| gtp cyclohydrolase | AX777_19175 | Not Available | Negative | 4538254 - 4538541 | 10226.3 |
| imidazoleglycerol-phosphate dehydratase | AX777_19180 | A5V9V7 | Negative | 4538570 - 4539157 | 21459.7 |
| hypothetical protein | AX777_19185 | Not Available | Positive | 4539256 - 4539732 | 17543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

