Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | AX777_18990 | P31833 | Positive | 4508950 - 4510629 | 61664.8 |
| protoheme ix farnesyltransferase | AX777_18995 | A5VD56 | Positive | 4510762 - 4511682 | 33026.3 |
| cytochrome c oxidase assembly protein | AX777_19000 | A6WWG2 | Positive | 4511816 - 4512391 | 21190.4 |
| cytochrome b562 | AX777_19005 | P06030 | Positive | 4512436 - 4513266 | 30782.7 |
| hypothetical protein | AX777_19010 | Not Available | Positive | 4513277 - 4513660 | 13406.6 |
| hypothetical protein | AX777_19015 | Not Available | Positive | 4513657 - 4514298 | 22811.1 |
| threonine synthase | AX777_19020 | P29363 | Positive | 4514343 - 4515743 | 50223.7 |
| sam-dependent methyltransferase | AX777_19025 | Not Available | Positive | 4515797 - 4516666 | 32513.7 |
| dna methylase | AX777_19030 | Not Available | Positive | 4516749 - 4517099 | 13242.7 |
| glutamine cyclotransferase | AX777_19035 | Q84WV9 | Negative | 4517169 - 4517870 | 26380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

