Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | AX777_18890 | Q8ZYS2 | Negative | 4489350 - 4490756 | 51634.8 |
| hemerythrin | AX777_18895 | Not Available | Negative | 4490767 - 4491237 | 18262.1 |
| hypothetical protein | AX777_18900 | Not Available | Negative | 4491299 - 4491655 | 12887.2 |
| biotin synthase | AX777_18905 | Not Available | Negative | 4491738 - 4492979 | 46810.4 |
| histidine kinase | AX777_18910 | P0DOA0 | Negative | 4493024 - 4494886 | 67334.6 |
| d-amino-acid oxidase | AX777_18915 | Not Available | Positive | 4495003 - 4496148 | 41533.5 |
| thioredoxin reductase | AX777_18920 | M1W428 | Negative | 4496183 - 4497076 | 31286.3 |
| rrf2 family transcriptional regulator | AX777_18925 | Not Available | Positive | 4497196 - 4497660 | 16715.5 |
| 5-oxoprolinase | AX777_18930 | Q8K010 | Positive | 4497707 - 4501288 | 125149.0 |
| class ii aldolase | AX777_18935 | Q9A8Z4 | Negative | 4501389 - 4502147 | 28069.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

