Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | AX777_07480 | A7EBU5 | Negative | 442357 - 445365 | 108048.0 |
| l-rhamnose mutarotase | AX777_07485 | Q28P47 | Negative | 445388 - 445702 | 12324.8 |
| exo-poly-alpha-d-galacturonosidase | AX777_07490 | Not Available | Negative | 445807 - 447342 | 55030.6 |
| rhamnogalacturonan acetylesterase | AX777_07495 | O31523 | Negative | 447355 - 448569 | 43327.4 |
| tonb-dependent receptor | AX777_07500 | Not Available | Positive | 448907 - 451849 | 106132.0 |
| iclr family transcriptional regulator | AX777_07505 | Not Available | Negative | 452003 - 452779 | 28224.9 |
| peptidoglycan-binding protein | AX777_07510 | Q8U9L5 | Negative | 452942 - 453454 | 18104.1 |
| translocation protein tolb | AX777_07515 | Q2G9L1 | Negative | 453574 - 454908 | 48032.6 |
| cell envelope biogenesis protein tola | AX777_07520 | Not Available | Negative | 454905 - 455828 | 32023.6 |
| protein tolr | AX777_07525 | Q9RMT1 | Negative | 455847 - 456317 | 16383.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

