Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AX777_12230 | Not Available | Positive | 4292897 - 4295902 | 105464.0 |
| integrase | AX777_12235 | Not Available | Positive | 4296255 - 4297526 | 46921.7 |
| lytic transglycosylase | AX777_12240 | O31608 | Negative | 4297613 - 4298269 | 23231.8 |
| virulence protein | AX777_12245 | Not Available | Positive | 4298395 - 4299324 | 33374.1 |
| methylase | AX777_12250 | Not Available | Positive | 4299366 - 4303607 | 153455.0 |
| hypothetical protein | AX777_12255 | P55587 | Positive | 4303661 - 4304074 | 15254.4 |
| hypothetical protein | AX777_12260 | Not Available | Positive | 4304068 - 4304805 | 26825.8 |
| hypothetical protein | AX777_12265 | Not Available | Negative | 4304871 - 4305383 | 18885.9 |
| hypothetical protein | AX777_12270 | Not Available | Positive | 4305674 - 4307368 | 64659.1 |
| dna polymerase i | AX777_12275 | Not Available | Positive | 4307361 - 4308911 | 57015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

