Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | AX777_11830 | Not Available | Positive | 4205372 - 4206241 | 31450.7 |
| glycosyl transferase family 1 | AX777_11835 | Not Available | Positive | 4206234 - 4207388 | 40982.6 |
| 2-nitropropane dioxygenase | AX777_11840 | Not Available | Positive | 4207482 - 4208885 | 51308.8 |
| hypothetical protein | AX777_11845 | Not Available | Positive | 4208885 - 4209100 | 7936.29 |
| s-(hydroxymethyl)glutathione dehydrogenase | AX777_11850 | P72324 | Positive | 4209619 - 4210731 | 39451.7 |
| glyoxalase | AX777_11855 | Not Available | Positive | 4210758 - 4211138 | 13244.8 |
| s-formylglutathione hydrolase | AX777_11860 | A1AXZ2 | Positive | 4211153 - 4211989 | 30207.5 |
| hypothetical protein | AX777_11865 | Not Available | Negative | 4212403 - 4212702 | 11428.4 |
| formyltetrahydrofolate deformylase | AX777_11870 | Q46339 | Negative | 4212742 - 4213611 | 32436.9 |
| calmodulin-binding protein | AX777_11875 | Not Available | Negative | 4213664 - 4214680 | 36367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

