Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | AX777_11730 | Not Available | Negative | 4186092 - 4186868 | 28564.3 |
| dctp deaminase | AX777_11735 | A5VDM8 | Negative | 4186902 - 4187456 | 20618.6 |
| cytidine deaminase | AX777_11740 | Q9KD53 | Negative | 4187464 - 4187937 | 15814.8 |
| glycoside hydrolase family 25 | AX777_11745 | Not Available | Negative | 4187934 - 4188566 | 22872.0 |
| hypothetical protein | AX777_11750 | Q1GV37 | Negative | 4188631 - 4189113 | 18378.1 |
| replicative dna helicase | AX777_11755 | Q9ZD08 | Positive | 4189239 - 4190726 | 54415.1 |
| hypothetical protein | AX777_11760 | Not Available | Negative | 4190764 - 4191159 | 14207.8 |
| glutaryl-7-aca acylase | AX777_11765 | Q9L9D7 | Negative | 4191199 - 4193088 | 69270.3 |
| tat pathway signal protein | AX777_11770 | Not Available | Negative | 4193165 - 4194976 | 65010.1 |
| phosphoadenosine phosphosulfate reductase | AX777_11775 | C1AUL1 | Negative | 4195116 - 4195901 | 28608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

