Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | AX777_21750 | E3PJ86 | Positive | 4019310 - 4021562 | 78136.9 |
| type ii secretion system protein gspe | AX777_21755 | Q00512 | Positive | 4021559 - 4023100 | 55553.9 |
| type ii secretion system protein gspf | AX777_21760 | P31705 | Positive | 4023093 - 4024310 | 44044.8 |
| type ii secretion system protein gspg | AX777_21765 | Q00514 | Positive | 4024406 - 4024870 | 16716.9 |
| type ii secretion system protein gsph | AX777_21770 | Not Available | Positive | 4024992 - 4025399 | 14351.3 |
| type ii secretion system protein gspi | AX777_21775 | Not Available | Positive | 4025500 - 4025826 | 11648.1 |
| type ii secretion system protein gspj | AX777_21780 | Not Available | Positive | 4025826 - 4026512 | 24928.9 |
| general secretion pathway protein gspk | AX777_21785 | P31706 | Positive | 4026499 - 4027494 | 34951.2 |
| general secretion pathway protein gspl | AX777_21790 | Not Available | Positive | 4027491 - 4028609 | 38812.9 |
| type ii secretory protein pulm | AX777_21795 | Not Available | Positive | 4028606 - 4029094 | 17549.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

