Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_21585 | Not Available | Negative | 3867626 - 3867922 | 11503.0 |
| pard protein (antitoxin to pare) | AX777_21590 | Q9A458 | Negative | 3867919 - 3868197 | 10471.0 |
| conjugal transfer protein trag | AX777_21595 | Not Available | Negative | 3868314 - 3870233 | 69674.8 |
| type iv secretion system protein virb11 | AX777_21600 | Not Available | Negative | 3870255 - 3871265 | 37315.8 |
| type vi secretion protein | AX777_21605 | P17800 | Negative | 3871269 - 3872558 | 43977.5 |
| conjugal transfer protein | AX777_21610 | P0A3W7 | Negative | 3872560 - 3873567 | 36654.8 |
| conjugal transfer protein traj | AX777_21615 | Q6G2B4 | Negative | 3873569 - 3874246 | 25013.7 |
| conjugal transfer protein trah | AX777_21620 | Not Available | Negative | 3874690 - 3875739 | 36010.1 |
| hypothetical protein | AX777_21625 | Not Available | Negative | 3875793 - 3876029 | 8710.55 |
| type vi secretion protein | AX777_21630 | Not Available | Negative | 3876033 - 3876755 | 25310.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

