Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | AX777_21945 | Not Available | Negative | 3794939 - 3795676 | 27548.3 |
| conjugal transfer protein trag | AX777_21950 | P13464 | Negative | 3795678 - 3797504 | 67503.8 |
| type iv secretion system protein virb11 | AX777_21955 | Q6FYW0 | Negative | 3797494 - 3798504 | 37225.6 |
| type iv secretion system protein virb10 | AX777_21960 | Q0GK35 | Negative | 3798501 - 3799679 | 41328.9 |
| conjugal transfer protein | AX777_21965 | Q8YDZ1 | Negative | 3799681 - 3800520 | 30646.4 |
| conjugal transfer protein traj | AX777_21970 | Not Available | Negative | 3800517 - 3801209 | 25996.8 |
| hypothetical protein | AX777_21975 | Not Available | Negative | 3801211 - 3801591 | 12644.2 |
| type iv secretion system protein virb6 | AX777_21980 | Not Available | Negative | 3801605 - 3802609 | 34733.8 |
| hypothetical protein | AX777_21985 | Not Available | Negative | 3802649 - 3802960 | 11319.5 |
| type iv secretion system protein virb5 | AX777_21990 | Not Available | Negative | 3802960 - 3803676 | 25688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

