Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate 1,2-dioxygenase large subunit | AX777_20420 | Q51601 | Positive | 3765847 - 3767208 | 51336.4 |
| benzoate 1,2-dioxygenase small subunit | AX777_20425 | Q51602 | Positive | 3767205 - 3767720 | 20128.6 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | AX777_20430 | P07772 | Positive | 3767731 - 3768516 | 27137.6 |
| succinyl-coa--3-ketoacid-coa transferase | AX777_20435 | B0RVK4 | Positive | 3768530 - 3769237 | 25763.8 |
| succinyl-coa--3-ketoacid-coa transferase | AX777_20440 | Not Available | Positive | 3769237 - 3769884 | 22247.2 |
| ferredoxin | AX777_20445 | X5CWH9 | Positive | 3769899 - 3770216 | 11061.9 |
| 3-oxoadipate enol-lactonase | AX777_20450 | Q7CWX3 | Positive | 3770219 - 3770989 | 26789.2 |
| beta-ketoadipyl coa thiolase | AX777_20455 | Q9I6R0 | Positive | 3770995 - 3772197 | 41517.0 |
| pyridine nucleotide-disulfide oxidoreductase | AX777_20460 | Q5S3I1 | Positive | 3772203 - 3773453 | 44368.2 |
| protein involved in catabolism of external dna | AX777_20465 | P37634 | Positive | 3773765 - 3774595 | 30619.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

