Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbi | AX777_13980 | P55406 | Positive | 3586990 - 3588192 | 41583.9 |
| transposase | AX777_13985 | Not Available | Positive | 3588194 - 3588424 | 8322.07 |
| hypothetical protein | AX777_13990 | Not Available | Positive | 3588421 - 3588672 | 9037.0 |
| phosphatidylinositol kinase | AX777_13995 | Not Available | Negative | 3588642 - 3589838 | 44178.2 |
| xre family transcriptional regulator | AX777_14000 | Not Available | Negative | 3589924 - 3590259 | 12393.1 |
| integrase | AX777_14005 | Not Available | Negative | 3590425 - 3591654 | 46493.5 |
| Trna-leu | Not Available | Not Available | Positive | 3591832 - 3591918 | Not Available |
| alpha/beta hydrolase | AX777_14015 | Q9NUJ1 | Positive | 3592077 - 3592829 | 27160.4 |
| hypothetical protein | AX777_14020 | Not Available | Positive | 3592829 - 3593728 | 31274.9 |
| hypothetical protein | AX777_14025 | Not Available | Positive | 3593815 - 3594057 | 7684.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

