Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein | AX777_05230 | P45406 | Negative | 3409475 - 3409885 | 15314.0 |
| alkyl hydroperoxide reductase | AX777_05235 | P36893 | Negative | 3409885 - 3410436 | 19657.0 |
| c-type cytochrome biogenesis protein ccmf | AX777_05240 | P45403 | Negative | 3410409 - 3412337 | 69004.7 |
| cytochrome c biogenesis protein ccme | AX777_05245 | Q2G8J0 | Negative | 3412334 - 3412780 | 15685.0 |
| heme abc transporter permease | AX777_05250 | P30962 | Negative | 3412911 - 3413633 | 26172.7 |
| amidophosphoribosyltransferase | AX777_05255 | P77935 | Positive | 3413818 - 3415296 | 53814.4 |
| oxidoreductase | AX777_05260 | P31808 | Positive | 3415393 - 3416109 | 24520.6 |
| cyclopropane-fatty-acyl-phospholipid synthase | AX777_05265 | O53732 | Negative | 3416106 - 3417374 | 47991.0 |
| deoxyribodipyrimidine photolyase | AX777_05270 | A9CJC9 | Negative | 3417412 - 3418788 | 52200.8 |
| rna pyrophosphohydrolase | AX777_05275 | Q1GSV9 | Positive | 3418978 - 3419463 | 18587.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

