Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | AX777_05180 | A5VDT3 | Negative | 3397754 - 3398560 | 28805.6 |
| hypothetical protein | AX777_05185 | Not Available | Negative | 3398632 - 3400248 | 56704.4 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | AX777_05190 | Q9HZP5 | Negative | 3400274 - 3401926 | 60564.5 |
| uracil-dna glycosylase | AX777_05195 | Not Available | Positive | 3402008 - 3402790 | 28183.1 |
| lytic murein transglycosylase | AX777_05200 | Not Available | Positive | 3402787 - 3404574 | 64291.7 |
| molybdenum cofactor biosynthesis protein | AX777_05205 | P0AF00 | Positive | 3404574 - 3405101 | 19069.7 |
| hypothetical protein | AX777_05210 | Not Available | Negative | 3405108 - 3405620 | 18556.0 |
| dna repair photolyase | AX777_05215 | Q58096 | Positive | 3405707 - 3406774 | 39543.5 |
| potassium transport protein kup | AX777_05220 | Not Available | Negative | 3406781 - 3408703 | 69798.5 |
| cytochrome c biosynthesis protein | AX777_05225 | Not Available | Negative | 3408837 - 3409478 | 22745.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

