Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | AX777_05130 | B1L3K8 | Positive | 3386787 - 3388385 | 58999.3 |
| aldehyde-activating protein | AX777_05135 | Not Available | Positive | 3388413 - 3388760 | 12433.8 |
| saccharopine dehydrogenase | AX777_05140 | P0DPE4 | Positive | 3388843 - 3390048 | 44574.3 |
| alpha/beta hydrolase | AX777_05145 | P70981 | Positive | 3390150 - 3391241 | 39951.0 |
| carboxynorspermidine decarboxylase | AX777_05150 | A8FNH9 | Positive | 3391249 - 3392421 | 42623.9 |
| decarboxylase | AX777_05155 | Not Available | Positive | 3392682 - 3393875 | 43278.5 |
| rna methyltransferase | AX777_05160 | Q9X3W2 | Negative | 3394039 - 3395244 | 42659.6 |
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | AX777_05165 | Q7NIE6 | Negative | 3395241 - 3396632 | 47232.0 |
| hypothetical protein | AX777_05170 | Not Available | Negative | 3396632 - 3396988 | 12080.5 |
| n-formylglutamate amidohydrolase | AX777_05175 | Not Available | Negative | 3397041 - 3397757 | 26005.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

