Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3340083 - 3340157 | Not Available |
| entericidin | AX777_04935 | Not Available | Positive | 3340300 - 3340428 | 4311.34 |
| hypothetical protein | AX777_04940 | Not Available | Negative | 3340478 - 3340663 | 6851.32 |
| atp-dependent protease subunit hslv | AX777_04945 | A5VEJ8 | Positive | 3340847 - 3341413 | 20192.2 |
| atp-dependent protease | AX777_04950 | Q16CY2 | Positive | 3341431 - 3342732 | 47878.5 |
| peptidase | AX777_04955 | Not Available | Positive | 3342845 - 3344971 | 78897.0 |
| proline--trna ligase | AX777_04960 | Q7X2P1 | Negative | 3345038 - 3346564 | 56786.9 |
| hypothetical protein | AX777_04965 | Not Available | Negative | 3346654 - 3346998 | 12516.9 |
| poly(3-hydroxybutyrate) depolymerase | AX777_04970 | P45373 | Negative | 3347005 - 3347583 | 21072.3 |
| poly-beta-hydroxybutyrate polymerase | AX777_04975 | Not Available | Positive | 3347708 - 3348682 | 34823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

