Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | AX777_09165 | Q1GTM7 | Positive | 3207159 - 3208139 | 36128.8 |
| cyclase | AX777_09170 | Q8FEY4 | Positive | 3208147 - 3208623 | 17912.1 |
| competence protein | AX777_09175 | P51967 | Negative | 3208569 - 3209087 | 17642.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AX777_09180 | A5V2U9 | Negative | 3209095 - 3210276 | 41777.9 |
| pp_02950 | AX777_09185 | Not Available | Positive | 3210393 - 3211415 | Not Available |
| pas domain-containing sensor histidine kinase | AX777_09190 | P10578 | Positive | 3211412 - 3212521 | 39622.1 |
| nitrogen regulation protein nr(i) | AX777_09195 | P45671 | Positive | 3212521 - 3213963 | 52343.3 |
| pas domain-containing sensor histidine kinase | AX777_09200 | Q04850 | Positive | 3214062 - 3216317 | 81622.7 |
| aaa family atpase | AX777_09205 | Q04849 | Positive | 3216307 - 3217680 | 50301.2 |
| rna-binding protein hfq | AX777_09210 | Q0APP7 | Positive | 3217837 - 3218319 | 17902.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

