Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4440 domain-containing protein | AX777_09015 | Not Available | Negative | 3165342 - 3165773 | 15959.0 |
| hypothetical protein | AX777_09020 | Not Available | Negative | 3165811 - 3167613 | 67559.3 |
| hypothetical protein | AX777_09025 | Not Available | Negative | 3167699 - 3170071 | 87404.0 |
| oxidoreductase | AX777_09030 | Q9I492 | Positive | 3170223 - 3171239 | 35046.9 |
| x-pro dipeptidase | AX777_09035 | P65811 | Negative | 3171255 - 3172457 | 42834.4 |
| fad-dependent oxidoreductase | AX777_09040 | A3KEZ1 | Negative | 3172461 - 3173726 | 45443.0 |
| dihydrodipicolinate synthase family protein | AX777_09045 | P75682 | Positive | 3173781 - 3174695 | 32991.8 |
| hydroxyproline-2-epimerase | AX777_09050 | A9M832 | Positive | 3174695 - 3175702 | 36376.6 |
| gntr family transcriptional regulator | AX777_09055 | Not Available | Positive | 3175788 - 3176438 | 24401.3 |
| amino acid permease | AX777_09060 | Not Available | Positive | 3176490 - 3177935 | 50234.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

