Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | AX777_08965 | P58082 | Negative | 3149637 - 3151166 | 52587.5 |
| imidazolonepropionase | AX777_08970 | A5VFA5 | Negative | 3151163 - 3152368 | 42217.6 |
| formimidoylglutamate deiminase | AX777_08975 | Q9HU77 | Positive | 3152458 - 3153813 | 48474.7 |
| histidine utilization repressor | AX777_08980 | P22773 | Positive | 3153810 - 3154520 | 25690.9 |
| amidohydrolase | AX777_08985 | Not Available | Negative | 3154646 - 3156292 | 60453.2 |
| tonb-dependent receptor | AX777_08990 | Not Available | Negative | 3156366 - 3159284 | 103142.0 |
| hydrolase | AX777_08995 | Not Available | Positive | 3159732 - 3161054 | 47903.9 |
| peptidase s10 | AX777_09000 | Not Available | Negative | 3161097 - 3162650 | 56354.0 |
| hypothetical protein | AX777_09005 | Not Available | Positive | 3162756 - 3163838 | 40456.1 |
| mfs transporter | AX777_09010 | Not Available | Negative | 3163843 - 3165345 | 53216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

