Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fmn adenylyltransferase | AX777_08560 | P0AG42 | Positive | 3058023 - 3058949 | 33003.7 |
| isoleucine--trna ligase | AX777_08565 | Q5NQQ7 | Positive | 3059101 - 3061971 | 107416.0 |
| signal peptidase ii | AX777_08570 | A5VCW2 | Positive | 3061968 - 3062480 | 19011.7 |
| hypothetical protein | AX777_08575 | Not Available | Positive | 3062480 - 3062914 | 14110.5 |
| arsr family transcriptional regulator | AX777_08580 | Not Available | Negative | 3062916 - 3063248 | 11784.2 |
| vanillate o-demethylase oxidoreductase vanb | AX777_08585 | Not Available | Negative | 3063235 - 3063690 | 17011.0 |
| hypothetical protein | AX777_08590 | Not Available | Negative | 3063755 - 3065242 | 54354.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AX777_08595 | Q2GC13 | Negative | 3065315 - 3067234 | 68162.7 |
| asnc family transcriptional regulator | AX777_08600 | P44308 | Negative | 3067245 - 3068267 | 37238.5 |
| nicotinamide mononucleotide transporter | AX777_08605 | Not Available | Negative | 3068264 - 3068833 | 20899.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

