Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | AX777_08510 | E1WGF1 | Negative | 3046102 - 3048201 | 75123.4 |
| rod shape-determining protein mred | AX777_08515 | Not Available | Negative | 3048198 - 3048725 | 19784.3 |
| rod shape-determining protein mrec | AX777_08520 | Not Available | Negative | 3048722 - 3049642 | 31995.6 |
| rod shape-determining protein mreb | AX777_08525 | Not Available | Negative | 3049660 - 3050706 | 36753.4 |
| dna mismatch repair protein mutl | AX777_08530 | A5V3J3 | Positive | 3050841 - 3052655 | 65069.0 |
| signal peptide peptidase sppa | AX777_08535 | Q8Z6F3 | Negative | 3052666 - 3054549 | 65926.4 |
| phosphoglyceromutase | AX777_08540 | A5VB15 | Positive | 3054704 - 3055390 | 25841.7 |
| n5-carboxyaminoimidazole ribonucleotide mutase | AX777_08545 | Q8FYW3 | Positive | 3055643 - 3056131 | 16648.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | AX777_08550 | P52559 | Positive | 3056140 - 3057210 | 37586.5 |
| diacylglycerol kinase | AX777_08555 | P12833 | Positive | 3057338 - 3057832 | 18080.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

