Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | AX777_16145 | P55390 | Positive | 3036553 - 3036759 | 7410.78 |
| hypothetical protein | AX777_16150 | Not Available | Positive | 3037194 - 3037400 | 7975.67 |
| hypothetical protein | AX777_16155 | Not Available | Negative | 3038562 - 3038753 | 6924.24 |
| hypothetical protein | AX777_16160 | Not Available | Positive | 3038774 - 3038956 | 7141.52 |
| spermidine synthase | AX777_16165 | Not Available | Negative | 3039109 - 3039981 | 31526.1 |
| transposase | AX777_16175 | Not Available | Positive | 3041420 - 3041746 | 12319.8 |
| transposase | AX777_16180 | Not Available | Positive | 3041743 - 3042648 | 34416.0 |
| Trna-lys | Not Available | Not Available | Positive | 3044658 - 3044733 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3044793 - 3044868 | Not Available |
| rod shape-determining protein roda | AX777_08505 | P44468 | Negative | 3044990 - 3046102 | 40140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

