Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyl adenosine modification protein tsad | AX777_15695 | Q1GP42 | Negative | 2946061 - 2947095 | 35291.5 |
| porphobilinogen deaminase | AX777_15700 | Q1GP41 | Positive | 2947140 - 2948066 | 32865.4 |
| uroporphyrinogen-iii synthase | AX777_15705 | Not Available | Positive | 2948063 - 2948722 | 22064.8 |
| hypothetical protein | AX777_15710 | Not Available | Positive | 2948751 - 2949623 | 31767.1 |
| alpha/beta hydrolase | AX777_15715 | Not Available | Positive | 2949735 - 2950484 | 26933.5 |
| hypothetical protein | AX777_15720 | Not Available | Negative | 2950489 - 2950938 | 16378.7 |
| glutamine--trna ligase | AX777_15725 | A5V932 | Negative | 2950983 - 2952317 | 49160.6 |
| nad synthetase | AX777_15730 | Q03638 | Negative | 2952409 - 2954070 | 61111.5 |
| phosphoribosylpyrophosphate synthetase | AX777_15735 | Q8FZF0 | Positive | 2954293 - 2955228 | 33378.2 |
| hypothetical protein | AX777_15740 | Not Available | Negative | 2955328 - 2955564 | 8338.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

