Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | AX777_10575 | Q11J65 | Positive | 2765240 - 2765719 | 17709.7 |
| 30s ribosomal protein s9 | AX777_10580 | A7INH2 | Positive | 2765719 - 2766255 | 18904.6 |
| transglutaminase | AX777_10585 | Not Available | Positive | 2766440 - 2769205 | 98949.2 |
| general stress protein csbd | AX777_10590 | Not Available | Positive | 2769293 - 2769475 | 6058.24 |
| alanine glycine permease | AX777_10595 | Q6LX42 | Negative | 2769635 - 2771002 | 47811.3 |
| phosphoglucosamine mutase | AX777_10600 | Q1GUJ4 | Positive | 2771096 - 2772436 | 47395.8 |
| hypothetical protein | AX777_10605 | P42878 | Positive | 2772563 - 2772787 | 8079.6 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | AX777_10610 | Q8FTH8 | Positive | 2772784 - 2773545 | 25745.5 |
| ribonuclease hii | AX777_10615 | Q1GUJ1 | Positive | 2773538 - 2774137 | 21432.8 |
| hypothetical protein | AX777_10620 | Not Available | Positive | 2774280 - 2774855 | 20523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

