Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ntp pyrophosphohydrolase | AX777_13000 | P08337 | Negative | 2582079 - 2582486 | 14835.2 |
| pilus assembly protein | AX777_13005 | Not Available | Positive | 2582567 - 2582752 | 6640.23 |
| pilus assembly protein | AX777_13010 | Not Available | Positive | 2582886 - 2583047 | 5514.9 |
| peptidase m48 ste24p | AX777_13015 | Not Available | Negative | 2583124 - 2584602 | 51911.8 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | AX777_13020 | A5V3X0 | Negative | 2584684 - 2585628 | 33534.3 |
| recombinase xerd | AX777_13025 | Q2NB52 | Negative | 2585640 - 2586569 | 33365.4 |
| hypothetical protein | AX777_13030 | Not Available | Negative | 2586584 - 2588413 | 63785.9 |
| hypothetical protein | AX777_13035 | Not Available | Negative | 2588419 - 2588604 | 6705.37 |
| shikimate kinase | AX777_13040 | Q2G733 | Positive | 2588699 - 2589247 | 20130.5 |
| 3-dehydroquinate synthase | AX777_13045 | Q5NPY8 | Positive | 2589238 - 2590347 | 39074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

