Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_12645 | Not Available | Negative | 2512168 - 2512485 | 11559.7 |
| dna ligase (nad(+)) liga | AX777_12650 | Q1GVQ2 | Negative | 2512495 - 2514606 | 76329.7 |
| hypothetical protein | AX777_12655 | Not Available | Negative | 2514603 - 2514794 | 6957.1 |
| transporter | AX777_12665 | Q9A6U9 | Negative | 2516965 - 2517753 | 29858.7 |
| histidine kinase | AX777_12670 | Not Available | Negative | 2517821 - 2518840 | 36878.3 |
| polyribonucleotide nucleotidyltransferase | AX777_12675 | Q2G5F5 | Negative | 2518988 - 2521303 | 83083.4 |
| 30s ribosomal protein s15 | AX777_12680 | Q5NQ31 | Negative | 2521506 - 2521775 | 10234.5 |
| pseudouridine synthase | AX777_12685 | Q2G5F3 | Negative | 2521793 - 2522818 | 35985.6 |
| had family hydrolase | AX777_12690 | Not Available | Positive | 2522930 - 2523625 | 25168.2 |
| gcn5 family acetyltransferase | AX777_12695 | Not Available | Negative | 2523629 - 2524171 | 19746.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

