Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | AX777_15395 | Q1RIJ6 | Positive | 247888 - 249144 | 46463.3 |
| hypothetical protein | AX777_15400 | Not Available | Positive | 249261 - 249980 | 25109.3 |
| phytanoyl-coa dioxygenase | AX777_15405 | Not Available | Negative | 250020 - 251042 | 38278.1 |
| quinone oxidoreductase | AX777_15410 | P43903 | Negative | 251189 - 252139 | 32548.9 |
| carboxymethylenebutenolidase | AX777_15415 | Q43914 | Negative | 252160 - 252861 | 25552.3 |
| hypothetical protein | AX777_15420 | Not Available | Positive | 253026 - 253283 | 9217.25 |
| trna modification gtpase trme | AX777_15425 | A5VA82 | Positive | 253284 - 254570 | 44937.1 |
| trna uridine 5-carboxymethylaminomethyl modification protein | AX777_15430 | Q2GC38 | Positive | 254660 - 256510 | 65272.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | AX777_15435 | Q1GP62 | Positive | 256507 - 257148 | 23452.0 |
| chromosome partitioning protein para | AX777_15440 | P0CAV7 | Positive | 257145 - 257927 | 28237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

