Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_12395 | Not Available | Negative | 2456379 - 2456645 | 9799.88 |
| peptide methionine sulfoxide reductase | AX777_12400 | B2VHZ5 | Negative | 2456759 - 2457292 | 19415.7 |
| dicarboxylate--coa ligase pima | AX777_12405 | P94547 | Negative | 2457338 - 2459059 | 62430.2 |
| cytoplasmic protein | AX777_12410 | Not Available | Negative | 2459208 - 2459891 | 25144.8 |
| alpha-mannosyltransferase | AX777_12415 | A0QRG8 | Negative | 2460007 - 2461035 | 36951.3 |
| udp-2,3-diacylglucosamine hydrolase | AX777_12420 | Not Available | Negative | 2461050 - 2461913 | 32642.3 |
| nad(p)h-quinone oxidoreductase | AX777_12425 | Q53FA7 | Negative | 2462029 - 2463036 | 35437.9 |
| atp-dependent clp protease atp-binding subunit clpa | AX777_12430 | P05444 | Positive | 2463493 - 2465829 | 85301.4 |
| hypothetical protein | AX777_12435 | Not Available | Positive | 2466513 - 2467193 | 24870.4 |
| hypothetical protein | AX777_12440 | Not Available | Positive | 2467293 - 2468027 | 25981.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

