Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | AX777_12295 | P0CAU3 | Negative | 2435943 - 2436407 | 17863.8 |
| hypothetical protein | AX777_12300 | Not Available | Negative | 2436928 - 2437632 | 23455.2 |
| host attachment protein | AX777_12305 | Not Available | Negative | 2437778 - 2438218 | 16507.5 |
| serine--trna ligase | AX777_12310 | Q2GA28 | Positive | 2438307 - 2439584 | 46056.8 |
| 5'/3'-nucleotidase sure | AX777_12315 | A5V3Z0 | Positive | 2439599 - 2440363 | 27368.6 |
| hypothetical protein | AX777_12320 | P45682 | Positive | 2440423 - 2441526 | 38048.6 |
| potassium transporter trka | AX777_12325 | O27564 | Positive | 2441523 - 2442581 | 38459.4 |
| tonb-dependent receptor | AX777_12330 | Not Available | Positive | 2442737 - 2445562 | 99876.5 |
| ribosomal protein s12 methylthiotransferase rimo | AX777_12335 | Q1GV83 | Positive | 2445672 - 2447039 | 49963.6 |
| hypothetical protein | AX777_12340 | Not Available | Negative | 2447058 - 2447900 | 30453.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

