Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transporter b | AX777_19680 | Q72SI0 | Positive | 2424179 - 2426035 | 65945.7 |
| single-stranded dna-binding protein | AX777_19685 | Not Available | Positive | 2426125 - 2426751 | 20963.9 |
| utp--glucose-1-phosphate uridylyltransferase | AX777_19695 | P27897 | Negative | 2428071 - 2428949 | 31556.2 |
| hypothetical protein | AX777_19700 | Not Available | Negative | 2429040 - 2429519 | 17825.6 |
| protease htpx | AX777_19705 | A5V7N3 | Positive | 2429945 - 2430892 | 33088.1 |
| sam-dependent methyltransferase | AX777_19710 | B5XNC2 | Positive | 2430932 - 2432242 | 46237.5 |
| diguanylate cyclase | AX777_19715 | Not Available | Positive | 2432294 - 2432779 | 17937.5 |
| ribulose phosphate epimerase | AX777_19720 | P51012 | Positive | 2432852 - 2433514 | 23564.7 |
| heparinase | AX777_19725 | Not Available | Positive | 2433511 - 2435277 | 63430.4 |
| pilus assembly protein pilz | AX777_12290 | Not Available | Negative | 2435515 - 2435883 | 13120.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

