Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_19380 | Not Available | Negative | 2365639 - 2366088 | 16391.2 |
| spermidine synthase | AX777_19385 | Not Available | Positive | 2366225 - 2366899 | 24088.3 |
| hypothetical protein | AX777_19390 | Not Available | Negative | 2367453 - 2368016 | 19405.2 |
| 30s ribosomal protein s13 | AX777_19395 | Q1GVN4 | Positive | 2368363 - 2368731 | 13628.8 |
| 30s ribosomal protein s11 | AX777_19400 | Q5NQ41 | Positive | 2368808 - 2369197 | 13964.7 |
| dna-directed rna polymerase subunit alpha | AX777_19405 | Q1GVN6 | Positive | 2369323 - 2370384 | 38245.1 |
| 50s ribosomal protein l17 | AX777_19410 | Q2G5B1 | Positive | 2370622 - 2371047 | 15730.9 |
| prolyl endopeptidase | AX777_19415 | Q06903 | Positive | 2371151 - 2373361 | 80795.2 |
| hypothetical protein | AX777_19420 | Not Available | Positive | 2373425 - 2374045 | 21971.0 |
| hypothetical protein | AX777_19425 | Not Available | Positive | 2374124 - 2374723 | 21082.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

