Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine biosynthesis protein metw | AX777_13275 | Q7UG04 | Positive | 2220568 - 2221161 | 21990.2 |
| arac family transcriptional regulator | AX777_13280 | Not Available | Negative | 2221169 - 2221780 | 21315.9 |
| choline dehydrogenase | AX777_13285 | Q9WWW2 | Positive | 2221946 - 2223556 | 57220.2 |
| short-chain dehydrogenase | AX777_13290 | P14802 | Negative | 2223558 - 2224379 | 28477.9 |
| subclass b3 metallo-beta-lactamase | AX777_13295 | P52700 | Negative | 2224440 - 2225366 | 32800.6 |
| lysr family transcriptional regulator | AX777_13300 | P24734 | Positive | 2225474 - 2226346 | 30982.7 |
| transcription elongation factor greb | AX777_13305 | Q9K0C5 | Negative | 2226447 - 2226932 | 17974.2 |
| lytic transglycosylase | AX777_13310 | Not Available | Negative | 2226978 - 2229050 | 74975.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AX777_13315 | A5V3L9 | Positive | 2229150 - 2230028 | 31042.8 |
| ssra-binding protein | AX777_13320 | A5V3L8 | Positive | 2230073 - 2230555 | 18500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

