Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_13225 | Not Available | Positive | 2203770 - 2207990 | 147694.0 |
| hypothetical protein | AX777_13230 | Not Available | Positive | 2208029 - 2208724 | 23915.0 |
| transglutaminase | AX777_13235 | Not Available | Positive | 2208788 - 2209594 | 29228.9 |
| alpha-n-arabinofuranosidase | AX777_13240 | P94552 | Positive | 2209651 - 2211288 | 58771.9 |
| 2-methylisocitrate lyase | AX777_13245 | Not Available | Negative | 2211322 - 2212074 | 25895.7 |
| hypothetical protein | AX777_13250 | Not Available | Positive | 2212165 - 2212983 | 27859.5 |
| nucleotidyltransferase | AX777_13255 | Not Available | Positive | 2212886 - 2214472 | 58181.2 |
| error-prone dna polymerase | AX777_13260 | Q2IU52 | Positive | 2214469 - 2218041 | 132874.0 |
| hydroxyacid dehydrogenase | AX777_13265 | A5CAL1 | Negative | 2218406 - 2219365 | 33837.8 |
| homoserine o-acetyltransferase | AX777_13270 | Q5NR05 | Positive | 2219441 - 2220571 | 40874.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

