Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | AX777_06905 | A5V8R9 | Positive | 1982383 - 1982676 | 10757.0 |
| cobalamin abc transporter atp-binding protein | AX777_06910 | Not Available | Negative | 1982794 - 1983777 | 36288.6 |
| hypothetical protein | AX777_06915 | Not Available | Positive | 1983961 - 1984404 | 15745.5 |
| hypothetical protein | AX777_06920 | Not Available | Negative | 1984463 - 1984696 | 7352.62 |
| circumsporozoite protein | AX777_06925 | Not Available | Negative | 1984781 - 1984999 | 6803.73 |
| arsr family transcriptional regulator | AX777_06930 | P15905 | Positive | 1985213 - 1986184 | 35570.7 |
| 5,10-methylenetetrahydrofolate reductase | AX777_06935 | P71319 | Positive | 1986181 - 1987101 | 33409.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | AX777_06940 | O33465 | Positive | 1987200 - 1988246 | 37416.7 |
| methionine synthase | AX777_06945 | Q9I2Q2 | Positive | 1988330 - 1990933 | 95617.8 |
| hypothetical protein | AX777_06950 | Not Available | Positive | 1991076 - 1991345 | 9857.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

