Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greab | AX777_06700 | P0AFW6 | Positive | 1942253 - 1942663 | 14649.7 |
| septation protein a | AX777_06705 | B6JAN9 | Negative | 1942685 - 1943338 | 23783.6 |
| signal recognition particle-docking protein ftsy | AX777_06710 | A9CHH2 | Negative | 1943328 - 1944266 | 33465.4 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | AX777_06715 | Q9ZDB6 | Negative | 1944266 - 1945507 | 44614.7 |
| diaminopimelate epimerase | AX777_06720 | Q5NNL4 | Negative | 1945510 - 1946322 | 28726.4 |
| pyridoxal-5'-phosphate-dependent protein | AX777_06725 | A4F2N8 | Negative | 1946363 - 1947355 | 33559.1 |
| tonb-dependent receptor | AX777_06730 | Q8Z314 | Positive | 1947908 - 1949752 | 65638.1 |
| abc transporter permease | AX777_06735 | O34451 | Positive | 1949727 - 1950743 | 34234.6 |
| abc transporter | AX777_06740 | Q9RKQ4 | Positive | 1950737 - 1951510 | 26767.0 |
| abc transporter substrate-binding protein | AX777_06745 | Not Available | Negative | 1951548 - 1952753 | 41847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

