Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX777_06345 | Not Available | Negative | 1875022 - 1875426 | 14758.9 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | AX777_06350 | A5VG00 | Negative | 1875432 - 1875887 | 15890.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | AX777_06355 | P44953 | Negative | 1875862 - 1877106 | 43464.4 |
| 2-octaprenylphenol hydroxylase | AX777_06360 | B1XWR5 | Negative | 1877156 - 1878697 | 56788.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | AX777_06365 | Q9X3X2 | Negative | 1878705 - 1879436 | 27199.6 |
| formamidopyrimidine-dna glycosylase | AX777_06370 | A5VG06 | Positive | 1879617 - 1880429 | 29454.6 |
| 30s ribosomal protein s20 | AX777_06375 | Q1GN81 | Positive | 1880547 - 1880810 | 9337.59 |
| chromosomal replication initiation protein dnaa | AX777_06380 | Q1GN68 | Positive | 1881242 - 1882660 | 51915.7 |
| peptidylprolyl isomerase | AX777_06385 | Not Available | Positive | 1882728 - 1883333 | 21118.6 |
| response regulator pled | AX777_06390 | Q9I310 | Negative | 1883344 - 1885038 | 60940.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

