Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AX777_06095 | Not Available | Negative | 1820273 - 1821523 | 45582.2 |
| tonb-dependent receptor | AX777_06100 | Not Available | Positive | 1821705 - 1823969 | 81719.8 |
| protein tyrosine phosphatase | AX777_06105 | Not Available | Positive | 1823993 - 1825084 | 39260.6 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | AX777_06110 | Q9A7W2 | Positive | 1825205 - 1826617 | 48826.4 |
| phosphoheptose isomerase | AX777_06115 | O31646 | Positive | 1826718 - 1827530 | 29809.4 |
| tonb-dependent receptor | AX777_06120 | Not Available | Positive | 1827851 - 1830577 | 97875.6 |
| tat pathway signal sequence domain protein | AX777_06125 | Not Available | Positive | 1830683 - 1831375 | 25530.4 |
| tat pathway signal sequence domain protein | AX777_06130 | O31530 | Positive | 1831399 - 1834107 | 98015.1 |
| oligogalacturonate lyase | AX777_06135 | Not Available | Positive | 1834122 - 1835444 | 48873.0 |
| hypothetical protein | AX777_06140 | Not Available | Positive | 1835455 - 1836066 | 21864.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

