Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase | AX777_24355 | P26405 | Positive | 163515 - 165008 | 52533.0 |
| hypothetical protein | AX777_24360 | Not Available | Negative | 165126 - 165380 | 9603.5 |
| hypothetical protein | AX777_24365 | Not Available | Negative | 165550 - 165786 | 9700.85 |
| aminoglycoside phosphotransferase (protein kinase related), diverged | AX777_24370 | Not Available | Negative | 166344 - 167165 | 30011.9 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | AX777_24375 | B0RVK6 | Negative | 167197 - 168630 | 51995.2 |
| hypothetical protein | AX777_24380 | Not Available | Positive | 168862 - 169206 | 12371.6 |
| conjugal transfer protein trai | AX777_24385 | Not Available | Negative | 169376 - 171340 | 73330.2 |
| hypothetical protein | AX777_24390 | Not Available | Negative | 171592 - 171993 | 14564.1 |
| lytic transglycosylase | AX777_24395 | Not Available | Negative | 172196 - 172843 | 23132.6 |
| s26 family signal peptidase | AX777_24400 | Not Available | Negative | 172831 - 173412 | 21746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

